Genome-wide primer design
|
Yes
|
No
|
No
|
Yes
|
No
|
No
|
No
|
Dependency
|
No
|
Yes
|
Yes
|
Yes
|
Yes
|
Yes
|
Yes
|
Installation required
|
No
|
Yes
|
Yes
|
Yes
|
Yes
|
Yes
|
No
|
Operating system
|
All Unix, MAC, Windows
|
Windows
|
–
|
Windows, MAC
|
All Unix, MAC, Windows
|
All Unix, Windows
|
Web
|
Genome coordinate informationa
|
Yes
|
No
|
No
|
No
|
No
|
No
|
No
|
SNP annotationa
|
Yes
|
No
|
No
|
Yes
|
No
|
No
|
No
|
Repeat element annotationa
|
Yes
|
No
|
No
|
Yes
|
No
|
No
|
No
|
CpG Islands annotationa
|
Yes
|
No
|
No
|
No
|
Yes
|
No
|
No
|
RefSeq gene annotationa
|
Yes
|
No
|
No
|
Yes
|
No
|
No
|
No
|
Restriction enzyme type-II cut sites identificationa
|
Yes
|
No
|
No
|
No
|
No
|
No
|
No
|
Multi-processing capability
|
Yes
|
Yes
|
No
|
Yes
|
No
|
Yes
|
No
|
Multiple target sequences
|
Yes
|
Yes
|
No
|
Yes
|
No
|
Yes
|
No
|
Target sequence number restrictiona
|
No
|
Yes
|
Yes
|
Yes
|
Yes
|
Yes
|
Yes
|
Target sequence length restrictiona
|
No
|
Yes
|
Yes
|
Yes
|
Yes
|
Yes
|
Yes
|
FASTA sequence selection by tool
|
Yes
|
No
|
No
|
Yes
|
Yes
|
No
|
No
|
Custom primer selection quality matrixa
|
Yes
|
No
|
No
|
No
|
No
|
No
|
No
|
Input file limitations
|
No
|
No
|
No
|
No
|
No
|
No
|
No
|
UCSC genome browser visualizationa
|
Yes
|
No
|
No
|
No
|
No
|
No
|
No
|
UCSC In-Silico primer design page cross-link
|
Yes
|
No
|
No
|
No
|
No
|
No
|
No
|
Availability
|
Free
|
Commercial
|
Commercial
|
Commercial
|
Free
|
Free
|
Free
|