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Table 2 Descriptive data of NR3C1 single markers in 218 participants using Haploview

From: The cardiovascular and hypothalamus-pituitary-adrenal axis response to stress is controlled by glucocorticoid receptor sequence variants and promoter methylation

Marker

Position

obsHET

predHET

HWpval

% geno

MAF

Alleles

TthIII1

−142766894

0.463

0.458

1.0

99.6

0.355

C:T

NR3C1-I

−142763714

0.356

0.331

0.368

98.7

0.209

T:C

1H

−142762357

0.241

0.232

0.8032

100.0

0.134

G:A

E22E

−142760532

0.075

0.072

1.0

100.0

0.037

G:A

R23K

−142760530

0.084

0.105

0.0437

99.1

0.055

G:A

Bcl1

−142758768

0.408

0.462

0.0988

100.0

0.362

C:G

9beta

−142637814

0.307

0.306

1.0

100.0

0.189

A:G

  1. HWpval p value for Hardy-Weinberg equilibrium, MAF minor allele frequency, obsHET observed heterozygosity, position chromosomal location, predHET predicted heterozygosity, % Geno genotyping frequency
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Clinical Epigenetics

ISSN: 1868-7083

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