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Table 1 Characteristics of study subjects in the training and testing sets according to case-control status for oral and pharyngeal carcinoma

From: CpG island methylation profile in non-invasive oral rinse samples is predictive of oral and pharyngeal carcinoma

 

Training set (n = 147)

 

Testing set (n = 76)

 
 

Case (n = 101)

Control (n = 46)

p difference

Case (n = 51)

Control (n = 25)

p difference

Age, median (range)

60.0 (23–86)

60.5 (46–88)

0.31e

58.0 (29–78)

59.0 (32–77)

0.82e

Sex

 Female

29 (28.7 %)

17 (37.0 %)

0.34f

16 (31.4 %)

8 (32.0 %)

>0.99f

 Male

72 (71.3 %)

29 (63.0 %)

 

35 (68.6 %)

17 (68.0 %)

 

Racea

 White

92 (91.1 %)

44 (95.7 %)

0.51f

47 (92.2 %)

20 (80.0 %)

0.15f

 Other

8 (7.9 %)

2 (4.3 %)

 

4 (7.8 %)

5 (20.0 %)

 

Smokingb

 Never

30 (31.3 %)

15 (32.6 %)

>0.99f

15 (31.3 %)

14 (56.0 %)

0.048f

 Ever

66 (68.8 %)

31 (67.4 %)

 

33 (68.8 %)

11 (44.0 %)

 

 Pack-yearsc, median (range)

31.0 (0.6–120)

24.0 (0.1–200)

0.18e

22.0 (0.9–94)

13.7 (0.8–62.5)

0.23e

Alcohol useb

 Non-drinker

7 (7.4 %)

7 (15.2 %)

0.18f

3 (6.3 %)

4 (16.0 %)

0.047f

 ≤2 drinks/day

51 (53.7 %)

27 (58.7 %)

 

25 (52.1 %)

17 (68.0 %)

 

 >2 drinks/day

37 (38.9 %)

12 (26.1 %)

 

20 (41.7 %)

4 (16.0 %)

 

HPV serologyd (E6 or E7 antibodies)

 Negative

62 (66.0 %)

–

–

26 (60.5 %)

–

–

 Positive

32 (34.0 %)

–

 

17 (39.5 %)

–

 

AJCC stage group

 I

24 (23.8 %)

–

–

13 (25.5 %)

–

–

 II

12 (11.9 %)

–

 

7 (13.7 %)

–

 

 III

13 (12.9 %)

–

 

5 (9.8 %)

–

 

 IV

52 (51.5 %)

–

 

26 (51.0 %)

–

 
  1. aRace data was missing for 1 case in the training set
  2. bSmoking and alcohol data were missing for 5 cases in the training set and 3 cases in the testing set
  3. cRestricted to ever-smokers
  4. dHPV16 E6 and/or E7 serology was missing for 7 cases in the training set and 8 cases in the testing set
  5. eWilcoxon rank-sum test
  6. fFisher’s exact test