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Table 1 Studies on epigenetic treatment alone

From: Epigenetic treatment of solid tumours: a review of clinical trials

Drug (s) and schedule

Study type - histology (number of patients)

Results and data provided

Reference

Abexinostat (S78454/PCI-24781)

p.o. 60 mg/m2 bid 4 days on/3 days off

Mixed tumours (15 pts)

PK/PD model predicts thrombocytopenia

[90]

Azacytidine + Valproate

Aza s.c. for 10 days q. 28 days.

MTD 75 mg/m2/day

VPA in plasma 75–100 μg/ml (a)

Dose escalation

Mixed tumours (55 pts)

PBMC: DNA methylation decreased. H3 acetylation increased. Patients with stable disease had more H3 acetylation.

DLT: neutropenic fever and thrombocytopenia

[68]

Azacytidine +Entinostat

Aza 30–40 mg/m2/day for days 1–6 and 8–10 q 28 days

Entinostat 7 mg/m2 days 3 and 10

Phase I/II trial

NSCLC (45 pts)

Demethylation of 4 epigenetically silenced genes (CDK2a, CDH13, APC, RASSF1a). In plasma DNA was associated with improved progression-free and overall survival

[62]

Azacytidine (AC) Phenylbutyrate (PHB)

AC 10-25mg/m2/day for 21 days,

75 mg/m2/day for 7 days

PHB 200–400 mg/m2 days 6, 13 and 20

Phase I

Mixed tumours (27 pts)

Toxicity: neutropenia, anaemia. No PK interaction

“No conclusive statement can be made on histone acetylation or methyltrasferase activity”.

[91]

Decitabine + VPA

Dec 5–15 mg/m2/day for 10 days.

VPA 10–20 mg/kg/day for days 5–21 q 28 days

Phase I

NSCLC (8 pts)

Neurological toxicity.

Increase in foetal Hb levels in all pts

[63]

Belinostat

1000 mg/m2/day i.v. for days 1–5 q 21 days

Phase II

Ovarian: platinum resistant (18 pts) or micropapillary (14 pts)

Toxicity: thrombosis (3 pts).

Increased H3 acetylation in PBMC and in two tumours

[73]

Belinostat

1000 mg/m2/day i.v. for days 1–5 q 21 days

Phase II

Refractory Thymic epithelial tumours (41 pts)

Nausea, vomiting, fatigue

Modest activity

Protein acetylation did not predict outcome

[92]

Belinostat

600–1400 mg/m2/day i.v. for days 1–5 q 3 weeks .

Phase I/II

Hepatocarcinoma (60 pts)

PK linear. MTD not reached at 1400 mg/m2.

Toxicity: abdominal pain, liver toxicity, vomiting.

Plasma concentrations higher than effective in vitro levels for 4 hours.

Disease stabilisation. High HR23B associated with more stabilisation.

[93]

Belinostat

1000 mg/m2/day i.v. for days 1–5 q 21 days

Mesothelioma (pre-treated) (13 pts)

Not active in terms of RR

toxicitiy: nausea, emesis, fatigue and constipation. One fatal cardiac arrhythmia

[94]

Belinostat, (oral formulation)

150–1000 mg/m2/day for days 1–5 q 21 days

Pharmacological evaluation

Mixed tumours (46 pts)

PK and PD: results similar to the parenteral formulation

[95]

CHR-3996

5–160 mg/day p. o.

RD 40 mg/day p.o.

Phase I

Mixed tumours (39 pts)

DLT: thrombocytopenia, fatigue, atrial fibrillation, ECG alterations, elevated creatinine.

AUC proportional to dose, plasma concentration sufficient for preclinical antitumour activity

Effect on histone acetylation in PBMC

[45]

CI-994

2–8 mg/m2/day

RD 8 mg/m2/day for 8 weeks q 10 weeks

Phase I

Mixed tumours (53 pts)

Toxicity: Thrombocytopenia (DLT).

PK data.

[48]

MGCD0103

12.5-56 mg/m2/day p.o.

3 times/week for 2 weeks q 3 weeks

RD 45 mg/m2/day

Phase I

Mixed tumours

Inhibition of HDAC activity and induction of acetylation of H3 histones in peripheral WBCs

[96]

MS-275

MTD 10 mg/m2 q14 days

Phase I

Mixed tumours (31 pts)

Toxicities: nausea, vomiting, anorexia, fatigue.

Half-life 39–80 hrs (longer than expected). Linear PK.

Increased H3 acetylation in PBMC. Peak plasma levels higher than effective in vitro concentration.

[97]

Panobinostat

20 mg p.o. twice/week

Pharmacological study

Mixed tumours (36 pts)

No effect of food on PK parameters

[98]

Panobinostat

40 mg p.o. three times/week

Sarcoma (47 pts)

Ovarian Sex Cord Tumours (5 pts)

Poorly tolerated. No activity in sarcoma. Activity in OSCT

Toxicity: thrombocytopenia, fatigue, anaemia

[99]

Panobinostat

20 mg/m2 for days 1 and 8 q 21 days

Prostate (35 pts)

No clinical activity

Toxicity: fatigue, thrombocytopenia, nausea

[100]

Panobinostat

20 mg

Mixed tumours (4 pts)

PK determined by trace radiolabelled 14C excretion

Rapid oral absorption, liver and renal excretion

[101]

Pivanex

2.34 g/m2/day in 6 h for 3 days q 21 days

Phase II

NSCLC (47 pts)

Toxicity: fatigue, nausea, dysgeusia-

3 partial responses (6%)

[102]

Quisinostat (JNJ-26481585)

Mixed tumours (92 pts)

Phase I

RD 12 mg days 1,3 and 5

Toxicity: cardiovascular, fatigue, nausea

PD: increased H3Ac in hair follicles, skin and tumour.

[103]

Resminostat

RD 600 mg/day p.o. for 5 days q 14 days

Phase I

Head-and-neck refractory

Toxicity: nausea, vomiting, fatigue.

PK data, HDAC inhibition, H4Ac increase in PBMC

[69]

Romidepsin

13 mg/m2 i.v. in 4 h for days 1, 8 and 15 q 28 days

Phase II

Refractory Prostate (35 pts)

Toxicity: nausea, fatigue, vomiting and anorexia

No antitumour activity

[104]

Romidepsin

13 mg/m2 in 4 h, for days 1, 8 and 15 q 28 days

Phase II

Head and Neck (14 pts)

Toxicity: nausea, vomiting, constipation, fatigue

H3 hyperacetylation in PBMC

Reduced or stable Ki67

On microarray 641 differentially expressed genes

No consistent change ion methylation of specific genes

Upregulation of p21Waf1/Cip1.

[70]

Romidepsin

New schedule: 1–9 mg/m2 in 4 h

for days 1, 3, and 5 q 21 days

RD 7 mg/m2

Phase I

Mixed tumours (28 pts)

Increase in 3HAc in PBMC. PK data described.

Toxicity: ECG changes

[54]

SAHA

400 mg/day p.o.

Phase II

Head-and-neck, refractory (13 pts)

No response. Toxicity: anaemia, anorexia, hyperglycemia, thrombocytopenia, dehydration

[82]

SAHA

400 mg/day p.o.

Phase II

Refractory Prostate (27 pts)

IL-6 was higher in patients with toxicity (Fatigue, nausea)

[105]

SAHA

400 mg for 14 days q 21 days

Phase II

Glioblastoma (66 pts)

Analysis of tumour tissue. Increased Acetylation of H2A, H3, H4. up-regulation of e-regulin.

PK influenced by enzyme-inducing drugs.

Toxicity: fatigue, thrombocytopenia. nausea, diarrhoea

[75]

SAHA

400 mg for 14 days q 21 days

Phase II

Breast (14 pts)

No antitumour activity.

Toxicity: Fatigue, nausea, diarrhoea, and lymphopenia

[106]

SAHA

400 mg for 14 days q 21 days

Phase II

Ovarian (27 pts)

No antitumour activity

Toxicity: Neutropenia, Leukopenia, Thrombocytopenia, Constitutional, Gastrointestinal, Metabolic

[107]

SAHA

400 mg for 14 days q 21 days

Phase II

NSCLC second line (16 pts)

No antitumour activity

Toxicity: fatigue, dehydration, hyperglycemia, mild

myelosuppression

[108]

SAHA

400–800 mg for 14 days q 21 days

RD 400 mg for 14 days q 21 days

Breast, colorectal, NSCLC (16 pts)

No antitumour activity. Toxicity anorexia, asthenia, nausea, thrombocytopenia, vomiting, weight loss

[60]

SAHA

400 mg for 14 days q 21 days

Thyroid (19 pts)

No antitumour activity

Toxicity: fatigue, dehydration, ataxia, pneumonia, bruises, thrombosis, thrombocytopenia

[109]

SAHA

600 mg bid days 1–3 q 7 days or 400 mg for 14 days q 21days

Phase I

Gastrointestinal (16 pts)

DLT thrombocytopenia.

Some PK data: AUC μM/h 7.75±2.79 for 400 mg; 3.94±1.56 with 300 mg.

t ½ 1.05±0.32 – 1.49±0.82 hours

[110]

SAHA

100–500 mg once or twice daily for 14 days q 21 days

Phase I

Mixed tumours (18 pts)

MTD not reached. Recommended dose 500 for once, 200 for twice daily.

Some PK data: AUC linear with dose

[111]

SAHA

300 or 400 mg bid days 1–3 q 7 days

Mesothelioma (pretreated) (13 pts)

2 PR.

Toxicity: fatigue, anorexia, dehydration, diarrhea,

nausea, and vomiting

[112]

SAHA

2 h i.v. infusion

75–900 mg/m2/day days 1–3 q 21 days

or 300–900 mg/m2/day days 1–5 q 21 days

Phase I

Mixed tumours (37 pts)

Toxicity: myelotoxicity, fatigue, anorexia, hyperglicemia

Increase in acetylated histones in PBMC and in tumour cells. PK data.

[113]

SAHA oral

MTD 400 mg/day or 600 mg/day days 1–3 q 7 days

Phase I

Mixed tumours (73 pts)

Toxicity: anorexia, dehydration, diarrhea, and fatigue. In PBMC acetylation increased 2 hrs after dose, back to basal levels at 8 hours

[114]

SAHA

300 mg tid

Breast (25 pts)

Decrease of proliferation-associated genes.

No effect on methylation

[115]

SAHA

400 mg daily continuously

Melanoma (39 pts)

Toxicity fatigue, nausea, lymphopenia, and hyperglycemia.

Some biochemical correlative data presented.

[116]

SAHA

300 mg tid days 1–3, 8–10, 15–17 q 21 days

Mesothelioma (pretreated) (329 pts)

Randomised phase III: no benefit

Toxicity: fatigue or malaise

[117]

SB939

10–80 mg/day p. o. 3 times/week for 3 weeks q 4 weeks

RD 60 mg/day

Phase I

Mixed tumours (30 pts)

DLT: fatigue, hypokalemia, ECG alterations.

AUC proportional to dose.

HDAC increases at doses 60 mg.

[118]

SB939

10–90 mg daily five times a week q 2 wks

RD 60 mg/day

Phase I

Mixed tumours (38 pts)

PK data. No correlation of AcH3 and response.

Toxicity: fatigue, nausea, vomiting.

[83]

Valproate

intravenous infusion in 1 h

30-250 mg/kg/day for days 1–5 q 21 days

RD 60 mg/kg/day

Phase I

Mixed tumours (26 pts)

Toxicity: neurological.

HDAC2 decreased; H3 Acetylation increased;

VPA plasma levels 0.3-0.9 mM.

[80]

Valproate

p. o. 20-40mg/kg/day for 5 days

Phase I

Cervical cancer (12 pts)

VPA in plasma 73–170 μg/ml. (0.4-1 mM)

No correlation of H3 acetylation in tumour biopsies and plasma VPA. Toxicity: Depressed consciousness

[79]

Valproate

500 mg p. o. tid (target concentration 50–100 μg/ml)

(0.3-0.6 mM)

Phase II

Low-grade Neuroendocrine (8 pts)

Two tumours had a 2-4-fold increase in Notch-1 mRNA, 3 had a decrease.

[71]

  1. The references are included at the end of the text
  2. 5FU 5-Fluorouracil, 5mC 5-methyl Cytosine, AUC area under the curve (also a dosing calculation for Carboplatin), Bid bis in die (twice a day), DLT dose-limiting toxicity, FEC combination of Fluorouracil, Epirubicin, Cyclophosphamide, FolFOx combination chemotherapy of Folinic acid, 5-Fluorouracil and Oxaliplatin, GI gastrointestinal, i.v. intravenously, MTD maximum tolerated dose, NSCLC non-small cell lung cancer, PBMC peripheral blood mononuclear cells, PD pharmacodynamic, PFS progression-free survival, PK pharmacokinetics, p.o. per os (orally), PR partial response, Pt patient, q every (Latin “quaque”), RA rapid acetylator (Hydralazyne metabolism), RD recommended dose, RR response rate, SA slow acetylator (Hydralazyne metabolism), SAHA Vorinostat, Zolinza ®, TS thymidylate Synthetase, target enzyme for 5FU activity, VPA Valproic Acid, WBC white blood cells
  3. (1) Oral dose of VPA titrated in each patient to obtain adequate plasma concentrations.