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Table 2 Top eight CpG sites with nRBC-distinct DNAm from white blood cells in cord blood

From: Nucleated red blood cells impact DNA methylation and expression analyses of cord blood hematopoietic cells

450K array CpG identifier

CpG location: chromosome, closest gene

Location in gene

Mean nRBC β (min., max.)

Mean non-erythroid cell β (min., max.)

cg05012676

16, ZFPM1

Intron

0.421

0.937

(0.298, 0.508)

(0.896, 0.963)

cg06768361

12, TESC

Intron; enhancera

0.336

0.924

(0.211, 0.426)

(0.825, 0.978)

cg10018933

2, HDAC4

Intron; enhancerb

0.410

0.922

(0.346, 0.468)

(0.890, 0.953)

cg15974642

10, IFIT1B

TSS200

0.362

0.939

(0.234, 0.475)

(0.904, 0.957)

cg18168751

4, IDUA

TSS1500; enhancera

0.435

0.951

(0.356, 0.556)

(0.924, 0.969)

cg20555305

8, CPSF1

Intron

0.369

0.878

(0.277, 0.481)

(0.823, 0.917)

cg25105522

17, MAP3K14

Intron; enhancerb

0.224

0.872

(0.126, 0.300)

(0.750, 0.962)

cg26876834

16, SNORA64 & RPS2

SNORA64: TSS1500

0.369

0.890

RPS2: Intron

(0.227, 0.440)

(0.839, 0.938)

  1. aBased on UCSC Genome Browser: ENCODE enhancer- and promoter-associated histone mark (H3K4Me1) in the K562 cell line
  2. bBased on Illumina 450K array annotation