From: MethPed: a DNA methylation classifier tool for the identification of pediatric brain tumor subtypes
Patient ID | Histopathologic diagnosis (WHO criteria) | MethPed classification | DIPG | Ependymoma | ETMR | Glioblastoma | MB_Gr3 | MB_Gr4 | MB_SHH | MB_WNT | Pilocytic astrocytoma |
---|---|---|---|---|---|---|---|---|---|---|---|
BPC-B2 | Glioblastoma | Glioblastoma | 0.03 | 0.06 | 0.03 | 0.64 | 0.02 | 0.01 | 0.01 | 0.00 | 0.21 |
BPC-B0 | Glioblastoma | Glioblastoma | 0.01 | 0.03 | 0.00 | 0.91 | 0.00 | 0.00 | 0.01 | 0.00 | 0.05 |
BPC-C3 | Glioblastoma | Glioblastoma | 0.01 | 0.04 | 0.01 | 0.86 | 0.01 | 0.00 | 0.01 | 0.00 | 0.06 |
BPC-C8 | Glioblastoma | Glioblastoma | 0.01 | 0.05 | 0.01 | 0.90 | 0.00 | 0.00 | 0.01 | 0.00 | 0.03 |
BPC-A6 | Glioneural tumor WHO grade IV | Glioblastoma | 0.02 | 0.09 | 0.02 | 0.61 | 0.01 | 0.02 | 0.01 | 0.00 | 0.22 |
BPC-C5 | Oligoastrocytoma WHO grade II | Glioblastoma | 0.05 | 0.05 | 0.01 | 0.75 | 0.01 | 0.01 | 0.01 | 0.01 | 0.10 |
BPC-A4 | Pilocytic Astrocytoma | Pilocytic astrocytoma | 0.01 | 0.03 | 0.00 | 0.19 | 0.00 | 0.00 | 0.00 | 0.00 | 0.77 |
BPC-B6 | Pilocytic Astrocytoma | Pilocytic astrocytoma | 0.02 | 0.05 | 0.01 | 0.28 | 0.00 | 0.00 | 0.00 | 0.00 | 0.63 |
BPC-B8 | Pilocytic Astrocytoma | Pilocytic astrocytoma | 0.01 | 0.05 | 0.00 | 0.21 | 0.00 | 0.01 | 0.00 | 0.00 | 0.72 |
BPC-A8 | Glioneuronal (pilocytic/pilomyxoid) | Pilocytic astrocytoma | 0.02 | 0.03 | 0.02 | 0.24 | 0.01 | 0.00 | 0.00 | 0.00 | 0.68 |
BPC-B5 | PNET | Glioblastoma | 0.03 | 0.30 | 0.03 | 0.58 | 0.01 | 0.00 | 0.01 | 0.01 | 0.03 |
BPC-B7 | PNET | Glioblastoma | 0.05 | 0.09 | 0.03 | 0.49 | 0.01 | 0.01 | 0.00 | 0.01 | 0.32 |
BPC-A7 | PNET | Glioblastoma | 0.03 | 0.10 | 0.05 | 0.74 | 0.02 | 0.01 | 0.01 | 0.02 | 0.03 |
BPC-C1 | Medulloblastoma (large-cell) | Mixed | 0.06 | 0.21 | 0.19 | 0.32 | 0.03 | 0.04 | 0.04 | 0.05 | 0.06 |
BPC-C4 | Medulloblastoma (desmoplastic) | MB_SHH | 0.01 | 0.07 | 0.02 | 0.09 | 0.02 | 0.01 | 0.74 | 0.03 | 0.02 |
BPC-A | Medulloblastoma | MB_Gr4 | 0.01 | 0.02 | 0.00 | 0.02 | 0.14 | 0.78 | 0.01 | 0.02 | 0.00 |
BPC-B1 | Medulloblastoma (classic) | MB_Gr4 | 0.00 | 0.03 | 0.01 | 0.01 | 0.06 | 0.89 | 0.01 | 0.01 | 0.01 |
BPC-A1 | Medulloblastoma (classic) | MB_Gr3 | 0.01 | 0.04 | 0.01 | 0.02 | 0.82 | 0.08 | 0.01 | 0.01 | 0.01 |