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Table 1 MethPed classification of the regional cohort

From: MethPed: a DNA methylation classifier tool for the identification of pediatric brain tumor subtypes

Patient ID Histopathologic diagnosis (WHO criteria) MethPed classification DIPG Ependymoma ETMR Glioblastoma MB_Gr3 MB_Gr4 MB_SHH MB_WNT Pilocytic astrocytoma
BPC-B2 Glioblastoma Glioblastoma 0.03 0.06 0.03 0.64 0.02 0.01 0.01 0.00 0.21
BPC-B0 Glioblastoma Glioblastoma 0.01 0.03 0.00 0.91 0.00 0.00 0.01 0.00 0.05
BPC-C3 Glioblastoma Glioblastoma 0.01 0.04 0.01 0.86 0.01 0.00 0.01 0.00 0.06
BPC-C8 Glioblastoma Glioblastoma 0.01 0.05 0.01 0.90 0.00 0.00 0.01 0.00 0.03
BPC-A6 Glioneural tumor WHO grade IV Glioblastoma 0.02 0.09 0.02 0.61 0.01 0.02 0.01 0.00 0.22
BPC-C5 Oligoastrocytoma WHO grade II Glioblastoma 0.05 0.05 0.01 0.75 0.01 0.01 0.01 0.01 0.10
BPC-A4 Pilocytic Astrocytoma Pilocytic astrocytoma 0.01 0.03 0.00 0.19 0.00 0.00 0.00 0.00 0.77
BPC-B6 Pilocytic Astrocytoma Pilocytic astrocytoma 0.02 0.05 0.01 0.28 0.00 0.00 0.00 0.00 0.63
BPC-B8 Pilocytic Astrocytoma Pilocytic astrocytoma 0.01 0.05 0.00 0.21 0.00 0.01 0.00 0.00 0.72
BPC-A8 Glioneuronal (pilocytic/pilomyxoid) Pilocytic astrocytoma 0.02 0.03 0.02 0.24 0.01 0.00 0.00 0.00 0.68
BPC-B5 PNET Glioblastoma 0.03 0.30 0.03 0.58 0.01 0.00 0.01 0.01 0.03
BPC-B7 PNET Glioblastoma 0.05 0.09 0.03 0.49 0.01 0.01 0.00 0.01 0.32
BPC-A7 PNET Glioblastoma 0.03 0.10 0.05 0.74 0.02 0.01 0.01 0.02 0.03
BPC-C1 Medulloblastoma (large-cell) Mixed 0.06 0.21 0.19 0.32 0.03 0.04 0.04 0.05 0.06
BPC-C4 Medulloblastoma (desmoplastic) MB_SHH 0.01 0.07 0.02 0.09 0.02 0.01 0.74 0.03 0.02
BPC-A Medulloblastoma MB_Gr4 0.01 0.02 0.00 0.02 0.14 0.78 0.01 0.02 0.00
BPC-B1 Medulloblastoma (classic) MB_Gr4 0.00 0.03 0.01 0.01 0.06 0.89 0.01 0.01 0.01
BPC-A1 Medulloblastoma (classic) MB_Gr3 0.01 0.04 0.01 0.02 0.82 0.08 0.01 0.01 0.01