Skip to main content

Table 1 MethPed classification of the regional cohort

From: MethPed: a DNA methylation classifier tool for the identification of pediatric brain tumor subtypes

Patient ID

Histopathologic diagnosis (WHO criteria)

MethPed classification

DIPG

Ependymoma

ETMR

Glioblastoma

MB_Gr3

MB_Gr4

MB_SHH

MB_WNT

Pilocytic astrocytoma

BPC-B2

Glioblastoma

Glioblastoma

0.03

0.06

0.03

0.64

0.02

0.01

0.01

0.00

0.21

BPC-B0

Glioblastoma

Glioblastoma

0.01

0.03

0.00

0.91

0.00

0.00

0.01

0.00

0.05

BPC-C3

Glioblastoma

Glioblastoma

0.01

0.04

0.01

0.86

0.01

0.00

0.01

0.00

0.06

BPC-C8

Glioblastoma

Glioblastoma

0.01

0.05

0.01

0.90

0.00

0.00

0.01

0.00

0.03

BPC-A6

Glioneural tumor WHO grade IV

Glioblastoma

0.02

0.09

0.02

0.61

0.01

0.02

0.01

0.00

0.22

BPC-C5

Oligoastrocytoma WHO grade II

Glioblastoma

0.05

0.05

0.01

0.75

0.01

0.01

0.01

0.01

0.10

BPC-A4

Pilocytic Astrocytoma

Pilocytic astrocytoma

0.01

0.03

0.00

0.19

0.00

0.00

0.00

0.00

0.77

BPC-B6

Pilocytic Astrocytoma

Pilocytic astrocytoma

0.02

0.05

0.01

0.28

0.00

0.00

0.00

0.00

0.63

BPC-B8

Pilocytic Astrocytoma

Pilocytic astrocytoma

0.01

0.05

0.00

0.21

0.00

0.01

0.00

0.00

0.72

BPC-A8

Glioneuronal (pilocytic/pilomyxoid)

Pilocytic astrocytoma

0.02

0.03

0.02

0.24

0.01

0.00

0.00

0.00

0.68

BPC-B5

PNET

Glioblastoma

0.03

0.30

0.03

0.58

0.01

0.00

0.01

0.01

0.03

BPC-B7

PNET

Glioblastoma

0.05

0.09

0.03

0.49

0.01

0.01

0.00

0.01

0.32

BPC-A7

PNET

Glioblastoma

0.03

0.10

0.05

0.74

0.02

0.01

0.01

0.02

0.03

BPC-C1

Medulloblastoma (large-cell)

Mixed

0.06

0.21

0.19

0.32

0.03

0.04

0.04

0.05

0.06

BPC-C4

Medulloblastoma (desmoplastic)

MB_SHH

0.01

0.07

0.02

0.09

0.02

0.01

0.74

0.03

0.02

BPC-A

Medulloblastoma

MB_Gr4

0.01

0.02

0.00

0.02

0.14

0.78

0.01

0.02

0.00

BPC-B1

Medulloblastoma (classic)

MB_Gr4

0.00

0.03

0.01

0.01

0.06

0.89

0.01

0.01

0.01

BPC-A1

Medulloblastoma (classic)

MB_Gr3

0.01

0.04

0.01

0.02

0.82

0.08

0.01

0.01

0.01