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Table 2 Age-methylated regions within 3 to 60 months after birth in blood leukocytes

From: Age-associated DNA methylation changes in immune genes, histone modifiers and chromatin remodeling factors within 5 years after birth in human blood leukocytes

Gene symbol

Gene name

Function

Locus

Number of CpGs

Illumina ID

Region length (bp)

TTC22

Tetratricopeptide repeat domain 22

Mediate protein-protein interactions and chaperone activity

1p32.3

3

cg24550149

454

cg15645660

cg11949335

SPEG

SPEG complex locus

Myocyte cytoskeletal development and marker of differentiated vascular smooth cells

2q35

3

cg14074251

51,924

cg26530345

cg02557933

SNED1

Sushi, nidogen and EGF-like domains 1

Membrane-bound signalling molecule; hormonal regulation

2q37.3

5

cg02532017

34,671

cg07644939

cg25241559

cg19075225

cg17053285

TRIM7

Tripartite motif containing 7

Ubiquitin protein ligase; Initiation of glycogen synthesis

5q35.3

2

cg17279652

170

cg26600753

DDR1

Discoidin domain receptor tyrosine kinase 1

Regulation of cell growth, differentiation and metabolism; cell communication with environment

6p21.3

3

cg16215084

238

cg00934322

cg09965419

TNXB

Tenascin XB

Anti-adhesive effect; matrix maturation during wound healing

6p21.3

3

cg19071976

51,088

cg16662408

cg02657865

MAD1L1

MAD1 mitotic arrest deficient-like 1

Mitotic spindle-assembly checkpoint; cell cycle control and tumour suppression

7p22

6

cg13700912

182,950

cg06555468

cg19513987

cg16026522

cg09174162

cg00963171

UPP1

Uridine phosphorylase 1

Phosphorolysis of uridine to free bases and ribose-1-phosphate

7p12.3

3

cg14983135

170

cg10317717

cg21484940

ZNF503

Zinc finger protein 503

TF; transcriptional regulation; neural precursor cell proliferation

10q22.2

2

cg13997975

553

cg03487027

DGKZ

Diacylglycerol kinase, zeta

Kinase; regulate diacylglycerol levels in intracellular signal transduction

11p11.2

2

cg18908017

3,940

cg09802018

B4GALNT1

Beta-1,4-N-acetyl-galactosaminyl transferase 1

Biosynthesis of G(M2) and G(D2) glycosphingolipids

12q13.3

2

cg09932758

1,936

cg25663970

BTBD11

BTB (POZ) domain containing 11

Transcription cofactor; Protein heterodimerization activity (?)

12q23.3

3

cg27567561

566

cg13935577

cg01478234

TEPP

Testis, prostate and placenta expressed

Unknown

16q21

2

cg12499872

91

cg00491255

CNTNAP1

Contactin-associated protein 1

Recruitment and activation of intracellular signalling pathways in neurons

17q21

2

cg16308533

39

cg11629889

TBCD

Tubulin folding cofactor D

Folding of beta-tubulin

17q25.3

2

cg16555866

35,310

cg00663986

NFIX

Nuclear factor I/X CCAAT-binding transcription factor

Transcription factor (TF)

19p13.3

4

cg06458248

9,812

cg27392771

cg01634146

cg10767662

LRFN1

Leucine-rich repeat and fibronectin type III domain containing 1

Promotes neurite outgrowth in hippocampal neurons. Regulates and maintain excitatory synapses

19q13.2

2

cg26910511

100

cg25156118

TMC2

Transmembrane channel-like 2

Ion channel; expression in the inner ear suggests that it may be crucial for normal auditory function

20p13

3

cg12233487

146

cg23648082

cg03243506

CLDN5

Claudin 5

Claudin (physical barrier to solutes); membrane protein and tight junctions

22q11.21

2

cg04463638

366

cg14553765