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Table 3 Computationally predicted functions by lncRNA-protein interactions

From: Identification of novel long non-coding RNAs in clear cell renal cell carcinoma

Predicted function

lnc-ACACA-1

lnc-BMP2-2

lnc-CPN2-1

lnc-FOXG1-2

lnc-FZD1-2

lnc-ITPR2-3

lnc-LCP2-2

lnc-RP3-368B9.1.1-1

lnc-SLC30A4-1

lnc-SPAM1-6

lnc-TTC34-3

mRNA processing

X

X

X

X

X

X

X

X

X

X

X

mRNA/RNA splicing

X

X

X

X

X

X

X

X

X

X

X

mRNA binding

 

X

X

X

X

X

X

 

X

X

X

RNA localization

X

X

   

X

X

X

X

X

X

Ribonucleoprotein complex

 

X

  

X

X

X

X

X

 

X

RNA transport

X

    

X

X

X

X

X

X

Transcription

X

    

X

X

X

X

X

X

Posttranscriptional regulation

 

X

X

X

X

X

 

X

   

mRNA/RNA stabilization

 

X

X

X

X

X

     

DNA binding

     

X

   

X

X

Translation

    

X

 

X

 

X

  

Protein localization

        

X

  

rRNA processing

        

X

  

Viral genome expression

        

X