From: DNA methylation-based subtype prediction for pediatric acute lymphoblastic leukemia
Methylation subtype | Confirmed subtype a | Subtype-like b | Unconfirmed subtype c | |||||||
---|---|---|---|---|---|---|---|---|---|---|
N | Karyotype d | RT-PCR e | CNA f | N | Karyotype d | Negative for fusion gene g | Novel fusion gene h | CNA f | N | |
T-ALL* | 0/1 (0%) | 0 | ND | ND | 0/1 (0%) | 0 | NA | ND | ND | 1/1 (100%) |
HeH* | 7/25 (28%) | 0 | ND | 7 | 18/25 (72%) | 8 | NA | ND | 13 | 0/25 (0%) |
t(12;21)* | 4/33 (12%) | 1 | 4 | ND | 22/33 (67%) | 0 | 19 | 3 | ND | 7/33 (21%) |
11q23/MLL* | 3/4 (75%) | 1 | ND | 3 | 1/4 (25%) | 0 | 1 | ND | ND | 0/4 (0%) |
t(1;19)* | 0/15 (0%) | 0 | ND | ND | 9/15 (60%) | 0 | 9 | 0 | 1 | 6/15 (40%) |
dic(9;20)* | 3/19 (16%) | 0 | ND | 3 | 16/19 (84%) | 5 | NA | 0 | 10 | 0/19 (0%) |
t(9;22)* | 0/5 (0%) | 0 | ND | ND | 3/5 (60%) | 0 | 3 | ND | ND | 2/5 (40%) |
iAMP21* | 4/4 (100%) | 4 | ND | 4 | 0/4 (0%) | 0 | NA | ND | ND | 0/4 (0%) |