Table 3 Genes positively associated with schizophrenia where methylation changed in response to olanzapine
From: The effects of olanzapine on genome-wide DNA methylation in the hippocampus and cerebellum
Genea | Reference (PubMedID) | Affected in | Peak length (bp) | Peak to transcription start site (bp) | Promoter class |
|---|---|---|---|---|---|
Nos1 | 20645313 | Hippocampus | 334 | -3,719 | LCP |
Map6 | 16624526 | Hippocampus | 169 | -2,382 | ICP |
Drd5 | 11304828 | Hippocampus | 844 | 41 | HCP |
Cacna1c | 23183239 | Hippocampus | 425 | -3,692 | LCP |
Bdnf | 16818862 | Hippocampus | 329 | -492 | ICP |
Gsksb | 18500637 | Hippocampus | 573 | -1,042 | HCP |
Tf | 18045615 | Hippocampus | 159 | -3,020 | LCP |
Cnp | 16389193 | Hippocampus | 464 | 1,198 | HCP |
Amacr | 20875727 | Hippocampus | 558 | 164 | HCP |
Psen2 | 19232479 | Hippocampus | 249 | 620 | LCP |
Pax6 | 10376119 | Hippocampus | 341 | 326 | ICP |
Dlx1 | 18384059 | Hippocampus | 431 | -2,043 | HCP |
Dlx1 | 18384059 | Cerebellum | 1,330 | 257 | HCP |
Cnp | 16389193 | Cerebellum | 769 | 940 | HCP |
Psen2 | 19232479 | Cerebellum | 455 | 442 | LCP |
Pax6 | 10376119 | Cerebellum | 349 | -3,481 | ICP |
Stx1a | 15219469 | Cerebellum | 149 | 72 | HCP |
Drd5 | 11304828 | Cerebellum | 264 | -169 | HCP |
Mmp9 | 20037727 | Cerebellum | 138 | -325 | LCP |
Tnf | 11244489 | Cerebellum | 269 | 49 | LCP |
Grin1 | 12679240 | Cerebellum | 264 | -1,595 | HCP |
Tf | 18045615 | Cerebellum | 749 | -1,704 | LCP |
Dlg4 | 21151988 | Cerebellum | 134 | -1,459 | LCP |
Amacr | 20875727 | Cerebellum | 138 | -48 | HCP |
Dao | 19685198 | Cerebellum | 287 | -2,385 | LCP |
Dlx1 | 18384059 | Liver | 171 | -2,993 | HCP |
Cnp | 16389193 | Liver | 644 | -2,644 | HCP |
Sod2 | 15193990 | Liver | 550 | 594 | HCP |
Drd5 | 11304828 | Liver | 369 | -316 | HCP |
Il6 | 20393813 | Liver | 789 | -3,030 | LCP |
Comt | 11381111 | Liver | 638 | -3,542 | HCP |
Apoe | 14674716 | Liver | 2,158 | -1,223 | LCP |
Drd2 | 18829695 | Liver | 257 | -91 | HCP |
Nos1 | 20645313 | Liver | 348 | 172 | LCP |
Drd1 | 20127886 | Liver | 540 | 739 | LCP |