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Table 3 Details of PCR primers used for molecular genetic studies

From: Putative molecular mechanism underlying sperm chromatin remodelling is regulated by reproductive hormones

Rat genes

PCR product (bp)

PCR primers

Gene ID/Accession /GenBank number

ube1x

 

Left primer: 5′-GAG-AGG-AAA-TGG-TTC-TCA-CAG-ATT-3′

 

363

Right primer: 5′-AAT-ACT-TGG-CAA-AGT-CAG-TCA-TCA-3′

314432

E217Kb/

 

Left primer: 5′-CAC-AGT-GGT-CTC-CAG-CAC-TAA-CTA-3′

 

ube2d2

379

Right primer: 5′-GCT-AGG-AGA-CAG-TGT-TGG-TAC-AGA-3′

U56407

huwe1 mouse fragment (ure-b1/e3)

 

Left primer: 5′-GGA-GTA-TGT-GAA-GTT-CGT-GAC-CTC-3′

 

365

Right primer: 5′-GTA-CCT-GTG-ACA-AAC-TGG-AGG-AAC-3′

59026

hdac6

 

Left primer: 5′-ACA-ACT-GCA-CAG-TGT-GCT-TCAG-3′

 

417

Right primer: 5′-ACA-AGG-TTG-GGA-CAC-ATC-TAGG-3′

84581

ubB

 

Left primer: 5′-GTT-TGT-TCC-TTC-ATC-GCA-TTC-3′

 

238

Right primer: 5′-GTG-CAG-GGT-TGA-CTC-TTT-CTG-3′

192255

cdyl

 

Left primer: 5′-CTA-CCT-AAG-AGC-ACT-CAC-CTG-AAG-3′

 

344

Right primer: 5′-ACA-CTT-GAT-CGG-GAT-CTG-AGAC-3′

361237

brdt

 

Left primer: 5′-CTC-AAG-CTG-CCT-GAC-TAT-TAC-ACC-3′

 

382

Right primer: 5′-GAG-AGA-GAC-AGA-CAT-CAG-GAA-ACC-3′

XM_573544

hdac1

 

Left primer: 5′-GAT-GTT-TCA-GCC-TAG-TGC-AGTG-3′

 

162

Right primer: 5′-GTA-TAG-CCA-TCT-CCT-CCC-AACA-3′

AF321129

miwiI/

 

Left primer: 5′-GAG-AGG-TTA-CAA-CCC-AAG-ACT-GAC-3′

 

piwiLi1

400

Right primer: 5′-GAG-GTA-GTA-GAG-ACG-GTT-GGA-CAG-3′

363912

mbd2

 

Left primer: 5′-GGC-AAG-AGC-GAT-GTC-TAC-TAC-TTC-3′

 

357

Right primer: 5′-GCT-AAG-TCC-TTG-TAG-CCT-CTT-CTC-3′

680172

pem(rhoX)

 

Left primer: 5′-GAG-TGT-CAA-GTC-TGA-GGA-TAA-GCA-3′

 

187

Right primer:5′-GTA-TGC-AGC-CCT-CCT-AAT-CTT-AAA-3′

NM_022175

cremΔC-G

 

Left primer: 5′-AGT-CTG-TAC-AGT-CCC-CAG-CAA-CTA-3′

 

variant

322

Right primer: 5′-GCA-AGG-GTT-AAG-AGA-CCC-ATC-TAC-3′

U048351

h2a somatic

 

Left primer: 5′-GAA-TAC-CTG-ACT-GCT-GAG-ATC-CTG-3′

 

320

Right primer: 5′-ACA-GGC-TCA-GTG-TAC-AGC-ACT-TC-3′

64646

h2b somatic

 

Left primer: 5′-AGA-AGA-AGG-ACG-GCA-AGG-AAC-3′

 

113

Right primer: 5′-CAT-GGC-CTT-GGA-AGA-GAT-TC-3′

64647

h3 somatic

 

Left primer: 5′-TCT-CAT-GAT-GCA-TGT-TTC-TGT-ATG-3′

 

345

Right primer: 5′-CAC-ACA-CCT-TAA-TGA-CAA-GAC-TCC-3′

117056

th2a

 

Left primer: 5′-CTC-TTT-CAG-AGC-AGG-TTT-GCAG-3′

 

320

Right primer: 5′-ACT-TGG-TCT-GGG-ACT-TGT-GGT-3′

24828

th2b

 

Left primer: 5′-AGT-CAC-CAA-GAC-CCA-GAA-GAAG-3′

 

113

Right primer: 5′-CTC-GAA-GAT-GTC-TGT-CAC-GAAG-3′

24829

h3t

 

Left primer: 5′-ACG-TGA-AAT-CGC-TCA-GGA-CT-3′

 

196

Right primer: 5′-TTA-TGC-TCT-CTC-CCC-TCG-AA-3′

682330

h4

 

Left primer: 5′-AGG-AGC-CCA-GAG-TTT-GTT-ACAC-3′

 

399

Right primer : 5′-CTG-GGA-GCA-ATC-TAG-AAG-GATG-3′

64627

Mouse β actin

 

Left primer: 5′-CTG-GCA-CCA-CAC-CTT-CTA-3′

 

238

Right primer: 5′-GGG-CAC-AGT-GTG-GGT-GAC-3′

007393(44)